Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015808992.1_cds_XP_016495579.1_9881
CDS Infomation

[gene=LOC107814653] [db_xref=GeneID:107814653] [protein=pyrophosphate-energized vacuolar membrane proton pump 1-like] [protein_id=XP_016495579.1] [location=join(6439..6673,7566..8140,8279..8658,8748..8834,9352..9682,10055..10465,10657..10716,11007..11213)] [gbkey=CDS]
Sequence

ATGGGGTTGATGAGTGAGGCCTTAACACAGATTCTGATACCTTTAGCTTCTCTTGTTGGC
ATTGGTTTTGCTCTGCTTCAGTGGTTTCTAGTCTCAAAGGTCAGAATCTCTAGTGGGTCA
GAATTGGAAGATGGATACAATGACATGTTGATTGAAGAAGATGTACAAGAAGAAGGCATT
GATTCTGATGCGGCTGTTGCCAAGTGTGCTGAGATTCAGAAAGCCATTTCTGAAGGGGCA
ACATCCTTCCTGTTCACGGAGTACAAATATCTCGGCATATTCATGGTGGTATTTGGAGCA
ATCATTTTTCTCTTCCTTGGATCAGTAAAAAAGTTCAGCACAGAAAGTGAGCCTTGCACT
TTCAACAAAGAAAATCTTTGCAAACCAGCCTTAGCCAATGCTATCTTCACCACCATTGCC
TTCTTTCTGGGGGCCCTAACTTCAGCCCTCTCTGGTTTCCTTGGAATGAAAATTGCAACA
TATGCCAATGCAAGAACAACTCTTGAAGCAAGGAAAAGCATTGGGAAGGCGTTCATAACA
GCTTTTCGCTCTGGTGCAGTTATGGGATTCCTACTAGCTGCCGATGGCCTCTTAGTTCTA
TATGTCTCAATCAACTTATTTAAGCTGTACTATGGAGATGATTGGGAGGGCCTATATGAA
TCTATTACTGGTTACGGTCTTGGAGGATCTTCAATGGCTCTCTTTGGAAGAGTTGGAGGA
GGTATATATACAAAAGCAGCAGATGTTGGTGCTGATCTAGTTGGAAAAGTTGAACATAAT
ATTCCTGAAGATGATCCGCGCAATCCAGCTGTAATAGCAGACAATGTAGGTGATAATGTA
GGGGATATTGCTGGAATGGGCTCGGATTTATTCGGTTCCTATGCTGAGTCATCATGTGCA
GCACTATTTGTTGCATCCATTTCATCCTTTGGTAGCAGCCATGACTACTCAGCTATGTCT
TATCCTCTGATTATCAGCTCAATGGGAATTATTGTTTGCCTGATAACTACTCTTTTTGCA
ACCGATATGTTTGAGATAAAGAATGTGACTGAGATTGAACCATCTTTGAAGAGGCAACTT
GTCATCTCAACTGTTCTGATGACCGTTGGAATTGCTTTTGTCAGCTTCTTCACTTTGCCA
TCAGAATTCACTATTTTCGACTTTGGAATGGAGAAAGTAGTGAAGAACTGGCACATATTC
TTCTGTGTTTCAATTGGTTTATGGGCTGGCTTGGTCATTGGTTATACTACTGAATATTAC
ACGAGCAATGCTTACAGTCCAGTTCAGGATGTGGCAGATTCTTGCAGGACTGGTGCTGCG
ACAAATGTCATATTTGGATTAGCTCTTGGATATAAATCTGTTATCATTCCCATATTTGCC
ATTGCCGCTTCTATATATGTGAGCTTCAGCTTGGCTGCTATGTATGGCATTGCAGTCGCT
GCTCTGGGAATGCTTAGCACTATAGCCACAGGGCTCGCAATAGATGCTTATGGCCCTATC
AGTGATAATGCTGGTGGAATTGCAGAGATGGCTGGAATGAGCCATAGCATCCGTGAAAGG
ACTGATGCTCTCGATGCTGCTGGAAACACAACAGCTGCAATTGGCAAGGGTTTCGCGATT
GGATCAGCTGCACTTGTCTCTCTTGCTTTATTTGGTGCCTACGTGAGCAGAGCTGGTATC
AAGACTGTCGATGTCTTGACACCAAAGGTCTTCATCGGATTAATAGTAGGGGCTATGCTT
CCGTATTGGTTCTCAGCCATGACAATGAAGAGTGTAGGAAGTGCAGCTCTGAAAATGGTT
GAAGAAGTTCGCAGGCAATTCAATAGTATCCCAGGATTAATGGAAGGAACAGCAAAACCA
GACTATGCAACTTGTGTCAAAATCTCAACTGATGCTTCCCTCAGAGAGATGATCCCGCCC
GGAGCTTTGGTCATGTTAACACCTCTTATTGCTGGTACCTTTTTTGGAGTCGAAACACTA
GCTGGTGTGCTTGCTGGTTCTCTCGTTTCTGGTGTTCAAGTTGCCATTTCAGCTTCAAAC
ACAGGTGGGGCATGGGATAATGCCAAGAAGTACATAGAGGCTGGTGCAACAGAACATGCT
AGAGCATTAGGACCAAAGGGATCAGATGCTCACAAGGCTGCAGTTATTGGAGATACAGTT
GGTGATCCTCTAAAAGACACTTCAGGTCCATCATTGAATATACTGATCAAACTCATGGCT
GTTGAATCTTTGGTCTTTGCTCCTTTCTTTGCCACTCATGGGGGTCTCCTCTTCAAGTTA
CTCTAG

Peptide Sequence

PEP ID

XP_016495579.1
PEP Infomation

PREDICTED: pyrophosphate-energized vacuolar membrane proton pump 1-like [Nicotiana tabacum]
Sequence

MGLMSEALTQILIPLASLVGIGFALLQWFLVSKVRISSGSELEDGYNDMLIEEDVQEEGI
DSDAAVAKCAEIQKAISEGATSFLFTEYKYLGIFMVVFGAIIFLFLGSVKKFSTESEPCT
FNKENLCKPALANAIFTTIAFFLGALTSALSGFLGMKIATYANARTTLEARKSIGKAFIT
AFRSGAVMGFLLAADGLLVLYVSINLFKLYYGDDWEGLYESITGYGLGGSSMALFGRVGG
GIYTKAADVGADLVGKVEHNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAESSCA
ALFVASISSFGSSHDYSAMSYPLIISSMGIIVCLITTLFATDMFEIKNVTEIEPSLKRQL
VISTVLMTVGIAFVSFFTLPSEFTIFDFGMEKVVKNWHIFFCVSIGLWAGLVIGYTTEYY
TSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFAIAASIYVSFSLAAMYGIAVA
ALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHSIRERTDALDAAGNTTAAIGKGFAI
GSAALVSLALFGAYVSRAGIKTVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMV
EEVRRQFNSIPGLMEGTAKPDYATCVKISTDASLREMIPPGALVMLTPLIAGTFFGVETL
AGVLAGSLVSGVQVAISASNTGGAWDNAKKYIEAGATEHARALGPKGSDAHKAAVIGDTV
GDPLKDTSGPSLNILIKLMAVESLVFAPFFATHGGLLFKLL

Transcript Sequence

Gene sequence data has not been registered.